BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016G03SP1|AL427057
(899 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1760 1724 0.0
>3x_Contig1760
Length = 27266
Score = 1724 bits (869), Expect = 0.0
Identities = 891/895 (99%), Gaps = 3/895 (0%)
Strand = Plus / Minus
Query: 1 gcttttgttgttcctccatggctgccatacgttgccatactttaagggactcttctggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21697 gcttttgttgttcctccatggctgccatacgttgccatactttaagggactcttctggat 21638
Query: 61 ggaaacatgcacgagacataaccatcaatccaatataatcagcctcagtttccatttccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21637 ggaaacatgcacgagacataaccatcaatccaatataatcagcctcagtttccatttccc 21578
Query: 121 tcgaagctggcattctgaccaacccatctactagaagtctgttgatcccatctaatccgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21577 tcgaagctggcattctgaccaacccatctactagaagtctgttgatcccatctaatccgg 21518
Query: 181 tgactgcatatatcaatgctcccagaatagagtaggccggggcctttgaaaggttttctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21517 tgactgcatatatcaatgctcccagaatagagtaggccggggcctttgaaaggttttctg 21458
Query: 241 ctgtgtgtctggcaagctgatgagcaaattcatgagataagaccgtagctaacccatcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21457 ctgtgtgtctggcaagctgatgagcaaattcatgagataagaccgtagctaacccatcct 21398
Query: 301 cattctgacatatcggtaagatgttgctgaagacaaacactttaccacctggaagcacaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21397 cattctgacatatcggtaagatgttgctgaagacaaacactttaccacctggaagcacaa 21338
Query: 361 atgcattaggtggtgctcttggatcattgacaatatgaattttccattgaacatctttca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21337 atgcattaggtggtgctcttggatcattgacaatatgaattttccattgaacatctttca 21278
Query: 421 acaggctttgatccacacttggatcgtgctcagcagcctccacaatccggtggaaaatct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21277 acaggctttgatccacacttggatcgtgctcagcagcctccacaatccggtggaaaatct 21218
Query: 481 tggtcactttcctcgttaatggatgcgattccggtaggattttccccttagtctcactaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21217 tggtcactttcctcgttaatggatgcgattccggtaggattttccccttagtctcactaa 21158
Query: 541 gaaccgagttgtaagtgtattggccaatcttgagttcaagtgaccttggcaaccagataa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21157 gaaccgagttgtaagtgtattggccaatcttgagttcaagtgaccttggcaaccagataa 21098
Query: 601 accttgttctcgcggtaacaggagcctcttctaaatgagtcaaatagaataacgatccgg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21097 accttgttctcgcggtaacaggagcctcttctaaatgagtcaaatagaataacgatccgg 21038
Query: 661 taccaaacactatagcgaggtatttcctcgaggttttgtcgaataacagctgtgtgaatg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21037 taccaaacactatagcgaggtatttcctcgaggttttgtcgaataacagctgtgtgaatg 20978
Query: 721 agtttcctgtgcggccattgaatcttttataagtgactcttggaatcggagtattgtaaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20977 agtttcctgtgcggccattgaatcttttataagtgactcttggaatcggagtattgtaaa 20918
Query: 781 atctagcctgaggtcttaaaagacggctgaaaacgttcttgaacatcagttgaaactatt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20917 atctagcctgaggtcttaaaagacggctgaaaacgttcttgaacatcagttgaaactatt 20858
Query: 841 atgaattgta-caacagtaatcagata-cacaaggttggagg-ttwatcagggta 892
|||||||||| |||||||||||||||| |||||||||||||| || |||||||||
Sbjct: 20857 atgaattgtaccaacagtaatcagataccacaaggttggaggtttaatcagggta 20803
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5515
Number of Sequences: 1807
Number of extensions: 5515
Number of successful extensions: 26
Number of sequences better than 1.0e-20: 1
length of query: 899
length of database: 10,358,551
effective HSP length: 16
effective length of query: 883
effective length of database: 10,329,639
effective search space: 9121071237
effective search space used: 9121071237
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)